STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2BGE8Carboxypeptidase S. (560 aa)    
Predicted Functional Partners:
A0A1Y2CYI8
N-acetyl-gamma-glutamyl-phosphate reductase.
  
 0.932
A0A1Y2CPX9
Histidine biosynthesis trifunctional protein.
    
 0.778
A0A1Y2BN59
Argininosuccinate synthase.
  
 0.770
A0A1Y2BQ19
FMN-linked oxidoreductase.
  
 0.715
A0A1Y2D028
PLP-dependent transferase.
  
 0.657
A0A1Y2CNL9
OTCace-domain-containing protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
    
 0.644
A0A1Y2D2Y8
Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate; Belongs to the ArgJ family.
    
 0.615
A0A1Y2C5L7
Uncharacterized protein.
    
 0.606
A0A1Y2AVB8
Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.591
A0A1Y2B3K7
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.591
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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