Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A1Y2B2C8 | A0A1Y2BCF9 | A0A1Y2B2C8 | A0A1Y2BCF9 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Nop14-like protein. | 0.999 |
A0A1Y2B2C8 | A0A1Y2BFF9 | A0A1Y2B2C8 | A0A1Y2BFF9 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Utp14-domain-containing protein. | 0.999 |
A0A1Y2B2C8 | A0A1Y2BGL4 | A0A1Y2B2C8 | A0A1Y2BGL4 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | DEAD-domain-containing protein; Belongs to the DEAD box helicase family. | 0.902 |
A0A1Y2B2C8 | A0A1Y2BRM5 | A0A1Y2B2C8 | A0A1Y2BRM5 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | RNA-binding domain-containing protein. | 0.891 |
A0A1Y2B2C8 | A0A1Y2C017 | A0A1Y2B2C8 | A0A1Y2C017 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | RRM domain-containing protein. | 0.972 |
A0A1Y2B2C8 | A0A1Y2C106 | A0A1Y2B2C8 | A0A1Y2C106 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Brix-domain-containing protein. | 0.923 |
A0A1Y2B2C8 | A0A1Y2CF29 | A0A1Y2B2C8 | A0A1Y2CF29 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | NOL1/NOP2/sun family putative RNA met; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.784 |
A0A1Y2B2C8 | A0A1Y2CNY3 | A0A1Y2B2C8 | A0A1Y2CNY3 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Eukaryotic rRNA processing. | 0.914 |
A0A1Y2B2C8 | A0A1Y2D1H1 | A0A1Y2B2C8 | A0A1Y2D1H1 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | WD40 repeat-like protein. | 0.999 |
A0A1Y2B2C8 | NOP7 | A0A1Y2B2C8 | A0A1Y2C7X4 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.803 |
A0A1Y2BCF9 | A0A1Y2B2C8 | A0A1Y2BCF9 | A0A1Y2B2C8 | Nop14-like protein. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.999 |
A0A1Y2BCF9 | A0A1Y2BFF9 | A0A1Y2BCF9 | A0A1Y2BFF9 | Nop14-like protein. | Utp14-domain-containing protein. | 0.999 |
A0A1Y2BCF9 | A0A1Y2BGL4 | A0A1Y2BCF9 | A0A1Y2BGL4 | Nop14-like protein. | DEAD-domain-containing protein; Belongs to the DEAD box helicase family. | 0.900 |
A0A1Y2BCF9 | A0A1Y2BRM5 | A0A1Y2BCF9 | A0A1Y2BRM5 | Nop14-like protein. | RNA-binding domain-containing protein. | 0.900 |
A0A1Y2BCF9 | A0A1Y2C017 | A0A1Y2BCF9 | A0A1Y2C017 | Nop14-like protein. | RRM domain-containing protein. | 0.837 |
A0A1Y2BCF9 | A0A1Y2C106 | A0A1Y2BCF9 | A0A1Y2C106 | Nop14-like protein. | Brix-domain-containing protein. | 0.863 |
A0A1Y2BCF9 | A0A1Y2CF29 | A0A1Y2BCF9 | A0A1Y2CF29 | Nop14-like protein. | NOL1/NOP2/sun family putative RNA met; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.887 |
A0A1Y2BCF9 | A0A1Y2CNY3 | A0A1Y2BCF9 | A0A1Y2CNY3 | Nop14-like protein. | Eukaryotic rRNA processing. | 0.863 |
A0A1Y2BCF9 | A0A1Y2D1H1 | A0A1Y2BCF9 | A0A1Y2D1H1 | Nop14-like protein. | WD40 repeat-like protein. | 0.999 |
A0A1Y2BCF9 | NOP7 | A0A1Y2BCF9 | A0A1Y2C7X4 | Nop14-like protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.914 |
page 1 of 6