STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2BHG4Uncharacterized protein. (180 aa)    
Predicted Functional Partners:
A0A1Y2C219
Peptidase C50 domain-containing protein.
   
 
 0.717
A0A1Y2C4V9
Uncharacterized protein.
   
 
 0.678
A0A1Y2CDV9
WD40 repeat-like protein.
   
 
 0.656
A0A1Y2D4P2
WD40 repeat-like protein.
   
 
 0.656
A0A1Y2BUE8
Uncharacterized protein.
     
 0.604
A0A1Y2C091
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Functions in the biosynthesis of the anionic phospholipids phosphatidylglycerol and cardiolipin; Belongs to the CDP-alcohol phosphatidyltransferase class-II family.
     
 0.601
A0A1Y2CCQ9
Uncharacterized protein.
   
 
 0.589
A0A1Y2C4X1
Acid phosphatase/Vanadium-dependent haloperoxidase.
     
 0.588
A0A1Y2CMX7
Mitotic spindle checkpoint component mad2.
   
 
 0.588
A0A1Y2CWR0
Uncharacterized protein.
     
 0.588
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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