STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2BM66Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. (536 aa)    
Predicted Functional Partners:
A0A1Y2CFT6
Homeobox.
    
 
 0.662
A0A1Y2B8B0
Homeobox domain-containing protein.
   
 0.578
A0A1Y2BNN2
Homeobox domain-containing protein.
   
 0.578
A0A1Y2C115
Homeobox domain-containing protein.
   
 0.578
A0A1Y2CNY6
Homeobox domain-containing protein.
   
 0.578
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.