Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A1Y2BFC2 | A0A1Y2BMN9 | t-SNARE. | COG4-domain-containing protein. | 0.860 |
A0A1Y2BFC2 | A0A1Y2BU64 | t-SNARE. | Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events. | 0.900 |
A0A1Y2BFC2 | A0A1Y2BWD5 | t-SNARE. | Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. | 0.606 |
A0A1Y2BFC2 | A0A1Y2C0E5 | t-SNARE. | Vps54-domain-containing protein. | 0.882 |
A0A1Y2BFC2 | A0A1Y2CBF9 | t-SNARE. | Uncharacterized protein. | 0.839 |
A0A1Y2BFC2 | A0A1Y2CQA7 | t-SNARE. | COG2-domain-containing protein. | 0.841 |
A0A1Y2BFC2 | A0A1Y2CRG5 | t-SNARE. | Uncharacterized protein. | 0.834 |
A0A1Y2BFC2 | A0A1Y2CUT2 | t-SNARE. | Dor1-domain-containing protein. | 0.908 |
A0A1Y2BFC2 | A0A1Y2CW71 | t-SNARE. | Sec34-domain-containing protein. | 0.840 |
A0A1Y2BFC2 | A0A1Y2D393 | t-SNARE. | t-SNARE. | 0.623 |
A0A1Y2BMN9 | A0A1Y2BFC2 | COG4-domain-containing protein. | t-SNARE. | 0.860 |
A0A1Y2BMN9 | A0A1Y2BU64 | COG4-domain-containing protein. | Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events. | 0.998 |
A0A1Y2BMN9 | A0A1Y2BWD5 | COG4-domain-containing protein. | Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. | 0.856 |
A0A1Y2BMN9 | A0A1Y2C0E5 | COG4-domain-containing protein. | Vps54-domain-containing protein. | 0.862 |
A0A1Y2BMN9 | A0A1Y2CBF9 | COG4-domain-containing protein. | Uncharacterized protein. | 0.998 |
A0A1Y2BMN9 | A0A1Y2CQA7 | COG4-domain-containing protein. | COG2-domain-containing protein. | 0.998 |
A0A1Y2BMN9 | A0A1Y2CRG5 | COG4-domain-containing protein. | Uncharacterized protein. | 0.998 |
A0A1Y2BMN9 | A0A1Y2CUT2 | COG4-domain-containing protein. | Dor1-domain-containing protein. | 0.999 |
A0A1Y2BMN9 | A0A1Y2CW71 | COG4-domain-containing protein. | Sec34-domain-containing protein. | 0.999 |
A0A1Y2BMN9 | A0A1Y2D393 | COG4-domain-containing protein. | t-SNARE. | 0.901 |
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