STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2BMS8Pkinase-domain-containing protein. (1037 aa)    
Predicted Functional Partners:
A0A1Y2BZ20
APG6-domain-containing protein.
    
 0.998
A0A1Y2C282
Autophagy-related protein.
   
 0.998
A0A1Y2C4X4
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
   
 0.998
A0A1Y2CQ74
DUF1649-domain-containing protein.
    
 0.997
A0A1Y2C203
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 0.996
A0A1Y2CBI0
Phosphatidylinositol 3-kinase VPS34.
    
 0.993
A0A1Y2CTY8
WD40 repeat-like protein.
    
 0.993
A0A1Y2CZ85
ATG11 domain-containing protein.
    
 0.983
A0A1Y2CSC6
Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy.
   
 
 0.982
A0A1Y2BV64
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.
    
 
 0.981
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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