STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2BP76Uncharacterized protein. (228 aa)    
Predicted Functional Partners:
A0A1Y2BS51
Uncharacterized protein.
    
  0.985
A0A1Y2CMJ7
Uncharacterized protein.
    
  0.985
A0A1Y2BUA0
Uncharacterized protein.
   
 0.867
A0A1Y2B8L8
TPR-like protein.
  
 0.753
A0A1Y2BFF9
Utp14-domain-containing protein.
   
 0.750
A0A1Y2D1H1
WD40 repeat-like protein.
   
 0.739
A0A1Y2BQ26
CBF-domain-containing protein.
   
  0.734
A0A1Y2CQS9
WD40 repeat-like protein.
   
 0.724
A0A1Y2AK45
SH3 domain-containing protein.
    
  0.717
A0A1Y2BRU1
Dbl homology domain-containing protein.
    
  0.717
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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