STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2BQN8Uncharacterized protein. (49 aa)    
Predicted Functional Partners:
A0A1Y2CHU0
Uncharacterized protein.
    
 0.545
A0A1Y2AWW8
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.535
A0A1Y2BVJ9
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.535
A0A1Y2BN39
Aldehyde dehydrogenase family 7 member A1; Belongs to the aldehyde dehydrogenase family.
  
 
 0.534
A0A1Y2CS25
Nitrilase.
  
 
 0.523
A0A1Y2BUZ4
Uncharacterized protein.
    
 0.515
A0A1Y2BTW9
FMN-dependent alpha-hydroxy acid dehydrogenase.
  
 
 0.513
COQ3
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
    
 0.503
A0A1Y2AQZ5
Lactamase_B domain-containing protein.
  
 
 0.488
A0A1Y2BFY3
Uncharacterized protein.
  
 
 0.488
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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