STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2BT84Peroxidase; Belongs to the peroxidase family. (682 aa)    
Predicted Functional Partners:
A0A1Y2CYD5
Nudix hydrolase domain-containing protein.
   
  0.750
BNA1
3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate.
    
 0.713
A0A1Y2CFS4
PDT-domain-containing protein.
    
 0.713
A0A1Y2BYA0
Dopa decarboxylase-like protein.
  
 
 0.712
BNA5
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family.
   
 0.712
A0A1Y2CUP0
Histidinol-phosphate aminotransferase.
    
 0.707
A0A1Y2D1F7
PLP-dependent transferase.
   
 0.704
A0A1Y2CML7
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
    
 0.698
A0A1Y2CQ55
Aspartate aminotransferase.
  
 0.635
A0A1Y2D3B7
PLP-dependent transferase.
  
 0.635
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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