STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2BTD0Uncharacterized protein; Belongs to the pirin family. (351 aa)    
Predicted Functional Partners:
A0A1Y2BSA5
Uncharacterized protein.
    
 0.672
A0A1Y2CYD5
Nudix hydrolase domain-containing protein.
   
  0.648
A0A1Y2C4V7
Uncharacterized protein.
   
 
 0.614
A0A1Y2CJE2
IGPS-domain-containing protein.
   
 
 0.580
A0A1Y2B4S4
Uncharacterized protein.
    
 0.569
A0A1Y2B8M8
Pirin domain-containing protein; Belongs to the pirin family.
  
     0.531
A0A1Y2D1X8
3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family.
   
 0.519
A0A1Y2D1Z3
3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.
   
 0.519
A0A1Y2CWY2
Uncharacterized protein.
    
 0.469
A0A1Y2CSQ7
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
   
 0.425
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.