STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2BUH0Uncharacterized protein. (395 aa)    
Predicted Functional Partners:
A0A1Y2C8M2
Uncharacterized protein.
    
 0.994
A0A1Y2BTG9
UBC-like protein.
   
 0.992
A0A1Y2CYK4
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.983
A0A1Y2D2S4
HECT domain-containing protein.
   
 0.947
A0A1Y2C8S4
WD40 repeat-like protein.
    
 0.946
A0A1Y2BU02
Uncharacterized protein.
   
 0.929
A0A1Y2BZR3
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.921
A0A1Y2CAP9
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.916
A0A1Y2CBS3
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.914
A0A1Y2B712
Ribosomal protein S3Ae.
   
 0.913
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.