STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2BUH6Uncharacterized protein. (548 aa)    
Predicted Functional Partners:
A0A1Y2CYA1
WD_REPEATS_REGION domain-containing protein.
    
 0.676
A0A1Y2BU77
Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.674
A0A1Y2B7F3
ARM repeat-containing protein.
    
 0.672
A0A1Y2CBS3
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 0.672
A0A1Y2C6U6
Uncharacterized protein.
    
 0.667
A0A1Y2BK67
Rap-GAP domain-containing protein.
    
 0.632
A0A1Y2CZ97
Putative intracellular transport protein.
    
 0.586
A0A1Y2BTZ7
PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.
    
 0.582
A0A1Y2BU20
FAT domain-containing protein.
    
 0.582
A0A1Y2C7N6
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.582
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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