STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2BVX8TPR-like protein. (712 aa)    
Predicted Functional Partners:
A0A1Y2CAQ7
G10 protein.
    
 0.999
A0A1Y2CD87
SKIP_SNW domain-containing protein.
  
 0.999
A0A1Y2CSK9
TPR-like protein.
   
0.999
A0A1Y2CYK5
RNA-binding domain-containing protein.
   
 0.999
A0A1Y2CAD9
Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.
    
 0.998
A0A1Y2CBM3
SYF2-domain-containing protein.
    
 0.998
A0A1Y2CVT0
Uncharacterized protein.
   
 0.997
A0A1Y2C9R6
WD40 repeat-like protein.
   
 
 0.995
A0A1Y2BN37
Slu7 domain-containing protein.
   
 
 0.994
A0A1Y2CAN6
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.994
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.