STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2BWU7Helical backbone metal receptor. (313 aa)    
Predicted Functional Partners:
A0A1Y2BRN0
Ankyrin.
   
 0.860
A0A1Y2C4B9
Uncharacterized protein.
   
 0.860
A0A1Y2B4Y8
Guanine nucleotide-binding protein, beta subunit.
   
 0.764
A0A1Y2BNA0
Lysophospholipase.
   
 0.744
A0A1Y2CR54
Serine/threonine-protein phosphatase.
    
 0.743
A0A1Y2BUE8
Uncharacterized protein.
     
 0.739
A0A1Y2BU77
Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.736
A0A1Y2B255
Uncharacterized protein.
   
 
 0.732
A0A1Y2C091
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Functions in the biosynthesis of the anionic phospholipids phosphatidylglycerol and cardiolipin; Belongs to the CDP-alcohol phosphatidyltransferase class-II family.
   
 0.729
A0A1Y2C2Z2
SH3 domain-containing protein.
   
  0.715
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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