STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2BX17Peptide hydrolase; Belongs to the peptidase M28 family. (472 aa)    
Predicted Functional Partners:
A0A1Y2CIF6
Actin-binding FH2.
   
  0.971
A0A1Y2BTP6
AAA-domain-containing protein; Belongs to the AAA ATPase family.
   
 
 0.566
A0A1Y2AN69
FAD-binding domain-containing protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
  
 0.541
A0A1Y2AN97
FAD-binding domain-containing protein.
  
 0.541
A0A1Y2AYE4
NMT1-domain-containing protein.
  
 0.541
A0A1Y2B4J4
Beta-lactamase/transpeptidase-like protein.
  
 0.541
A0A1Y2B842
Beta-lactamase/transpeptidase-like protein.
  
 0.541
A0A1Y2B999
Beta-lactamase/transpeptidase-like protein.
  
 0.541
A0A1Y2BCM1
Uncharacterized protein.
  
 0.541
A0A1Y2BS91
Uncharacterized protein.
  
 0.541
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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