STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2BX53Uncharacterized protein. (120 aa)    
Predicted Functional Partners:
A0A1Y2C3S2
Uncharacterized protein.
   
   0.621
A0A1Y2AJ30
Ribosomal_L18e/L15P domain-containing protein.
   
 
 0.572
A0A1Y2CUY8
Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.
   
 
 0.556
A0A1Y2CYG9
Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
   0.547
A0A1Y2CSN9
Ribosomal protein S16.
   
   0.543
A0A1Y2B728
Uncharacterized protein.
   
   0.540
A0A1Y2CMK8
Uncharacterized protein.
   
 
 0.521
A0A1Y2BC55
Ribosomal protein L24.
   
   0.500
A0A1Y2C363
ClpS-like protein.
   
   0.487
A0A1Y2C7U9
Uncharacterized protein.
   
 
 0.468
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.