STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2BX81SEP-domain-containing protein. (347 aa)    
Predicted Functional Partners:
A0A1Y2BYY5
PFU-domain-containing protein.
    
 
 0.978
A0A1Y2CJ70
UBX domain-containing protein.
    
 0.976
A0A1Y2CYF7
OTU-domain-containing protein.
   
 
 0.975
A0A1Y2BFC5
AAA-domain-containing protein.
   
 0.971
A0A1Y2CX91
AAA ATPase; Belongs to the AAA ATPase family.
   
 0.971
A0A1Y2C997
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 
 0.965
A0A1Y2CCL6
U-box domain-containing protein.
    
 
 0.957
A0A1Y2CDH4
AAA-domain-containing protein.
   
 0.942
A0A1Y2D243
AAA-domain-containing protein; Belongs to the AAA ATPase family.
   
 0.942
A0A1Y2CF60
UFD1-domain-containing protein.
   
 
 0.930
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.