STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2BXJ4Uncharacterized protein. (124 aa)    
Predicted Functional Partners:
A0A1Y2CXW8
Uso1_p115_head domain-containing protein.
   
 0.878
A0A1Y2BEJ7
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.835
A0A1Y2CHE4
Uncharacterized protein.
   
 0.825
A0A1Y2BFR0
GTP-binding protein ypt1.
   
 0.812
A0A1Y2ARK5
Nefa_Nip30_N domain-containing protein.
    
 0.796
A0A1Y2C7K0
Uncharacterized protein.
    
 0.796
A0A1Y2CI19
Ras-related protein rab-2B.
   
 0.778
A0A1Y2CYC2
Uncharacterized protein.
   
 0.773
A0A1Y2BYW5
Golgi transport protein Sly1; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.768
A0A1Y2C209
Cornichon.
   
 0.761
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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