STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2BY09Uncharacterized protein. (1257 aa)    
Predicted Functional Partners:
A0A1Y2CBF0
Guanylate kinase-like domain-containing protein.
   
 
 0.881
A0A1Y2B832
Dpy-30-domain-containing protein.
    
 
 0.666
A0A1Y2C9W5
WD40 repeat-like protein.
   
  
 0.632
A0A1Y2CMH5
Calponin-homology (CH) domain-containing protein.
   
   0.588
A0A1Y2CEJ3
Phosphatases II.
   
 
 0.580
A0A1Y2C6F6
Uncharacterized protein.
    
 
 0.572
A0A1Y2CL26
ARM repeat-containing protein.
    
   0.560
A0A1Y2CS88
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.560
A0A1Y2AKV3
ARM repeat-containing protein.
    
 
 0.555
A0A1Y2CE62
ARM repeat-containing protein.
    
 
 0.555
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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