STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2BYX5Pyridoxal kinase. (316 aa)    
Predicted Functional Partners:
A0A1Y2BN27
Pyridoxine/pyridoxamine 5'-phosphate oxidase.
    
 0.890
A0A1Y2BVZ7
SNO glutamine amidotransferase.
    
 0.860
A0A1Y2C428
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
 
 
    0.854
A0A1Y2CKW8
Uncharacterized protein.
  
 
 0.822
A0A1Y2D3E1
Pyridoxine biosynthesis protein pyroA; Belongs to the PdxS/SNZ family.
   
 0.818
A0A1Y2BQ65
Pyridox_oxase_2 domain-containing protein.
     
 0.800
A0A1Y2BV70
Pyridoxal phosphate homeostasis protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which may be involved in intracellular homeostatic regulation of pyridoxal 5'- phosphate (PLP), the active form of vitamin B6; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
  
  
 0.783
A0A1Y2CCY1
Uncharacterized protein.
     
 0.750
A0A1Y2AYE4
NMT1-domain-containing protein.
    
  0.745
A0A1Y2CCL8
PLP-dependent transferase.
    
  0.745
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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