STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2BZI4Uncharacterized protein. (504 aa)    
Predicted Functional Partners:
A0A1Y2C080
Pkinase-domain-containing protein.
   
 
 0.844
A0A1Y2CNQ4
Pkinase-domain-containing protein.
   
 
 0.844
A0A1Y2D1L0
Kinase-like protein.
   
 
 0.844
A0A1Y2C7Q4
UEV-domain-containing protein.
    
 
 0.811
A0A1Y2CLY3
Mo25-like protein.
    
 
 0.733
A0A1Y2BUA0
Uncharacterized protein.
    
  0.707
A0A1Y2BXI1
Mob1/phocein.
    
 
 0.611
A0A1Y2ASB6
PHD finger-like domain-containing protein 5A.
    
  0.585
A0A1Y2BX74
Small nuclear ribonucleoprotein Sm D3.
    
 0.573
A0A1Y2C083
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.565
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.