STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2C0J5VPS37 C-terminal domain-containing protein. (108 aa)    
Predicted Functional Partners:
A0A1Y2C7Q4
UEV-domain-containing protein.
   
 0.992
A0A1Y2ALF2
Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.989
A0A1Y2AX10
ESCRT-II-domain-containing protein.
    
 0.921
A0A1Y2CSL8
Vps36-domain-containing protein.
     
 0.905
A0A1Y2BRL4
Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
     
 0.896
A0A1Y2CA45
Snf7-domain-containing protein.
    
 0.858
A0A1Y2CQ12
Uncharacterized protein.
     
 0.858
A0A1Y2CGG0
Uncharacterized protein.
     
 0.843
A0A1Y2CPF0
Uncharacterized protein.
   
 
 0.743
A0A1Y2CAA9
VHS domain-containing protein.
    
 0.733
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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