STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2C1G2Adenosylmethionine--8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (437 aa)    
Predicted Functional Partners:
A0A1Y2CYI8
N-acetyl-gamma-glutamyl-phosphate reductase.
  
 
 0.996
A0A1Y2BU45
Biotin synthase.
 
 0.990
A0A1Y2BEE6
Argininosuccinate lyase.
  
 
 0.922
A0A1Y2D2Y8
Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate; Belongs to the ArgJ family.
  
 
 0.916
A0A1Y2BN59
Argininosuccinate synthase.
  
 0.888
A0A1Y2C6D6
2-amino-3-ketobutyrate coenzyme A ligase.
   
 0.880
A0A1Y2CS63
DUF619-domain-containing protein.
  
 
 0.873
A0A1Y2CK47
PLP-dependent transferase.
   
 0.843
A0A1Y2CNL9
OTCace-domain-containing protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.825
A0A1Y2CMF4
Arginase/deacetylase; Belongs to the arginase family.
  
 0.795
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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