STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2C1J5Six-hairpin glycosidase. (508 aa)    
Predicted Functional Partners:
A0A1Y2D3B6
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.869
A0A1Y2CF63
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.860
A0A1Y2BTW9
FMN-dependent alpha-hydroxy acid dehydrogenase.
  
 0.812
A0A1Y2C107
Nucleoside diphosphate kinase; Belongs to the NDK family.
  
 0.808
A0A1Y2CFW6
Nucleoside diphosphate kinase; Belongs to the NDK family.
  
 0.808
A0A1Y2CYV0
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 0.792
A0A1Y2CH16
Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
  
 0.789
A0A1Y2AYD5
Ribosomal_L18_c domain-containing protein.
  
 
 0.788
A0A1Y2CJF5
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 0.785
A0A1Y2CYB5
Uncharacterized protein.
  
 0.785
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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