STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2C1M6Uncharacterized protein. (461 aa)    
Predicted Functional Partners:
A0A1Y2CH57
Uncharacterized protein.
   
 
 0.847
A0A1Y2CIB8
DUF1212-domain-containing protein.
    
 0.809
A0A1Y2B5J5
MFS general substrate transporter.
     
 0.660
A0A1Y2CAS9
MFS general substrate transporter.
     
 0.660
A0A1Y2CAT2
MFS general substrate transporter.
     
 0.660
A0A1Y2CB75
MFS general substrate transporter.
     
 0.660
A0A1Y2CN73
MFS general substrate transporter.
     
 0.660
A0A1Y2BZL8
Synaptobrevin.
   
 
 0.643
A0A1Y2CBS9
V-SNARE coiled-coil homology domain-containing protein.
   
 
 0.643
A0A1Y2CJY5
Synaptobrevin.
   
 
 0.643
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.