STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2C3D4Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (166 aa)    
Predicted Functional Partners:
A0A1Y2AYD5
Ribosomal_L18_c domain-containing protein.
  
 
 0.999
A0A1Y2B3S9
Uncharacterized protein.
  
 
 0.999
A0A1Y2B3Z6
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
   
 
 0.999
A0A1Y2B434
Ribosomal protein L28e.
   
 
 0.999
A0A1Y2B712
Ribosomal protein S3Ae.
   
 0.999
A0A1Y2B7L4
Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.999
A0A1Y2BC55
Ribosomal protein L24.
  
 
 0.999
A0A1Y2BEP0
Ribosomal protein L32e.
  
 
 0.999
A0A1Y2BFK9
Ribosomal protein S8.
  
 0.999
A0A1Y2BN55
60S ribosomal protein L7.
  
 
 0.999
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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