STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2C3G5PHD-type domain-containing protein. (317 aa)    
Predicted Functional Partners:
A0A1Y2D1G6
MRG-domain-containing protein.
    
 
 0.982
A0A1Y2D3N6
HDAC_interact domain-containing protein.
   
 
 0.980
A0A1Y2CNF1
WD40 repeat-like protein.
    
 
 0.925
A0A1Y2D3S5
Uncharacterized protein.
   
 
 0.914
A0A1Y2CE04
ADP-ribosylglycohydrolase.
    
 
 0.902
A0A1Y2CNP9
WD40 repeat-like protein.
    
 
 0.859
A0A1Y2BUB8
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 
 0.793
A0A1Y2C5B5
Arginase/deacetylase.
   
 
 0.793
A0A1Y2CW60
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 
 0.793
A0A1Y2CX96
Histone deacetylase.
   
 
 0.793
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.