STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2C3M8Uncharacterized protein. (318 aa)    
Predicted Functional Partners:
A0A1Y2C8J4
TPR_REGION domain-containing protein.
    
 0.888
A0A1Y2CUP0
Histidinol-phosphate aminotransferase.
    
 0.888
A0A1Y2BU05
Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
    
 0.886
A0A1Y2BP20
Phosphoglycerate mutase-like protein.
  
 
 0.847
A0A1Y2BZZ7
Bifunctional 6-phosphofructo-2-kinase/fructose-2,6-bisphosphate 2-phosphatase.
  
 
 0.847
A0A1Y2CIV9
Ribosomal protein S5 domain 2-like protein.
  
 
 0.847
A0A1Y2B5J9
RnaseH-domain-containing protein.
    
 0.718
A0A1Y2CAS3
Ribonuclease H-like protein.
    
 0.718
A0A1Y2CSG0
Tetrapyrrole biosynthesis, uroporphyrinogen III synthase.
     
 0.593
A0A1Y2BZP6
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
  
  
 0.565
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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