STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2C4B5Uncharacterized protein. (1484 aa)    
Predicted Functional Partners:
A0A1Y2BTP6
AAA-domain-containing protein; Belongs to the AAA ATPase family.
  
 0.629
A0A1Y2CHN4
Cysteine proteinase; Belongs to the peptidase C19 family.
    
  0.587
A0A1Y2C997
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
  0.565
A0A1Y2CES3
RING-type domain-containing protein.
    
 0.555
A0A1Y2CMJ3
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.542
A0A1Y2BAJ9
Uncharacterized protein.
    
  0.538
A0A1Y2BEN5
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
  0.538
A0A1Y2BFC5
AAA-domain-containing protein.
   
 0.523
A0A1Y2CDH4
AAA-domain-containing protein.
   
 0.523
A0A1Y2CX91
AAA ATPase; Belongs to the AAA ATPase family.
   
 0.523
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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