STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2C6N2Putative mitochondrial ornithine carrier protein AmcA/Ort1; Belongs to the mitochondrial carrier (TC 2.A.29) family. (312 aa)    
Predicted Functional Partners:
A0A1Y2CJZ4
Uncharacterized protein.
    
 0.643
A0A1Y2CUV4
Uncharacterized protein; Belongs to the phosphohexose mutase family.
    
 0.611
A0A1Y2C3I9
Phosphoacetylglucosamine mutase; Catalyzes the conversion of GlcNAc-6-P into GlcNAc-1-P during the synthesis of uridine diphosphate/UDP-GlcNAc, which is a biosynthetic precursor of chitin and also supplies the amino sugars for N-linked oligosaccharides of glycoproteins. Belongs to the phosphohexose mutase family.
    
 0.535
A0A1Y2BU16
Uncharacterized protein.
    
 0.501
A0A1Y2C3J0
Uncharacterized protein.
    
 0.501
A0A1Y2C886
Uncharacterized protein.
    
 0.501
A0A1Y2CDN5
Uncharacterized protein.
    
 0.501
A0A1Y2CDU1
Uncharacterized protein.
    
 0.501
A0A1Y2CQP9
Uncharacterized protein.
    
 0.501
A0A1Y2D1V5
Uncharacterized protein.
    
 0.501
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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