STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2C7Z3RNI-like protein. (739 aa)    
Predicted Functional Partners:
A0A1Y2CUS1
WD40 repeat-like protein.
    
 0.752
A0A1Y2CXJ2
HSP90-domain-containing protein.
    
 0.732
A0A1Y2BD18
MPN domain-containing protein.
    
  0.720
A0A1Y2CGN6
Ubiquitin-domain-containing protein.
    
  0.686
A0A1Y2CS21
Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.
     
 0.673
A0A1Y2BV64
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.
     
 0.671
A0A1Y2CH04
Uncharacterized protein.
     
 0.661
A0A1Y2AG98
Nuclear transcription factor Y subunit beta.
     
 0.658
A0A1Y2BUI3
Histone-fold-containing protein.
     
 0.658
A0A1Y2BX00
Ubiquitin.
    
  0.650
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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