STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2C948DUF1692-domain-containing protein. (313 aa)    
Predicted Functional Partners:
A0A1Y2C226
Serologically defined breast cancer antigen 84 isoform b.
  
 
0.993
A0A1Y2BEN5
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
   0.953
A0A1Y2BAJ9
Uncharacterized protein.
   
   0.865
A0A1Y2BDI4
HCP-like protein.
  
   0.864
A0A1Y2BMX6
HCP-like protein.
  
   0.864
A0A1Y2CU38
5-methylaminomethyl-2-thiouridylate-methyltransferase.
  
 0.837
A0A1Y2CK63
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
 
    
 0.611
A0A1Y2CCX0
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
   0.584
A0A1Y2CK88
Tyrosine--tRNA ligase.
     
 0.578
A0A1Y2B747
Uncharacterized protein.
   
 
 0.576
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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