STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2C9E4SWIM-type domain-containing protein. (606 aa)    
Predicted Functional Partners:
A0A1Y2CNK9
Uncharacterized protein.
    
 0.728
A0A1Y2BDV6
Ubiquitin-domain-containing protein.
    
 0.649
A0A1Y2CGN6
Ubiquitin-domain-containing protein.
    
 0.649
A0A1Y2BUH0
Uncharacterized protein.
    
  0.630
A0A1Y2BUH3
AN1-type domain-containing protein.
    
  0.630
A0A1Y2BX00
Ubiquitin.
    
  0.630
A0A1Y2BZ49
Ubiquitin.
    
  0.630
A0A1Y2CTB7
Ubiquitin-like domain-containing protein.
    
  0.630
A0A1Y2D0R7
AN1-type domain-containing protein.
    
  0.630
A0A1Y2AYD1
UBC-like protein.
   
  0.602
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.