STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CAF9t-SNARE; Belongs to the syntaxin family. (399 aa)    
Predicted Functional Partners:
A0A1Y2C8V7
TPR-like protein.
    
 0.954
A0A1Y2CQR6
AAA-domain-containing protein; Belongs to the AAA ATPase family.
    
 0.940
A0A1Y2BFW1
Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.939
A0A1Y2CYH1
Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.939
A0A1Y2BZL8
Synaptobrevin.
    
 0.936
A0A1Y2CBS9
V-SNARE coiled-coil homology domain-containing protein.
    
 0.917
A0A1Y2B7N2
Snare-like protein; Belongs to the synaptobrevin family.
    
 0.910
A0A1Y2CK64
Snare-like protein; Belongs to the synaptobrevin family.
    
 0.874
A0A1Y2D351
V-SNARE coiled-coil homology domain-containing protein.
    
 0.858
A0A1Y2CJY5
Synaptobrevin.
    
 0.818
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.