STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CAM3Uncharacterized protein. (54 aa)    
Predicted Functional Partners:
A0A1Y2CDY9
Uncharacterized protein.
     
 0.877
A0A1Y2CRE1
B9 domain-containing protein 1.
     
 0.877
A0A1Y2BNI2
WD40 repeat-like protein.
     
 0.856
A0A1Y2CS29
Uncharacterized protein.
     
 0.852
A0A1Y2BXT9
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.787
A0A1Y2CBR3
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.787
A0A1Y2CZ80
Uncharacterized protein.
   
 
 0.785
A0A1Y2CZB1
Uncharacterized protein.
   
 
 0.785
A0A1Y2CYC9
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
     
 0.767
A0A1Y2B6D4
B9 domain-containing protein 2-like protein.
     
 0.742
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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