STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CBR7UBC-like protein; Belongs to the ubiquitin-conjugating enzyme family. (284 aa)    
Predicted Functional Partners:
A0A1Y2C3X9
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.996
A0A1Y2CA09
TPR-like protein.
    
 0.996
A0A1Y2CX38
TPR-like protein.
    
 0.996
A0A1Y2D061
Uncharacterized protein.
    
 0.994
A0A1Y2BX26
TPR-like protein.
    
 0.993
A0A1Y2BEK1
APC1_C domain-containing protein.
    
 0.992
A0A1Y2CVU5
ANAPC5 domain-containing protein.
    
 0.992
A0A1Y2C4H5
Ubiquitin-conjugating enzyme E2C, isoform CRA_c; Belongs to the ubiquitin-conjugating enzyme family.
   
0.985
A0A1Y2C4B0
Uncharacterized protein.
   
 0.982
A0A1Y2CX81
RNase H domain-containing protein.
    
 0.958
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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