STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CC11Tetrapyrrole methylase. (445 aa)    
Predicted Functional Partners:
A0A1Y2BFI6
Porphobilinogen deaminase.
 
 
 0.934
A0A1Y2D0L6
Flavodoxin-like domain-containing protein.
  
 
 0.929
A0A1Y2BPI1
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
 
 
 0.922
A0A1Y2CSG0
Tetrapyrrole biosynthesis, uroporphyrinogen III synthase.
  
 
 0.856
A0A1Y2C201
Uroporphyrinogen decarboxylase.
    
 0.841
A0A1Y2C8U6
FAD-binding FR-type domain-containing protein.
  
 
 0.792
A0A1Y2C8J4
TPR_REGION domain-containing protein.
  
 
 0.787
A0A1Y2C2S3
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
  
  
 0.784
MET3
Sulfate adenylyltransferase; Catalyzes the first intracellular reaction of sulfate assimilation, forming adenosine-5'-phosphosulfate (APS) from inorganic sulfate and ATP. Plays an important role in sulfate activation as a component of the biosynthesis pathway of sulfur-containing amino acids. In the N-terminal section; belongs to the sulfate adenylyltransferase family.
  
  
 0.751
A0A1Y2D067
Adenine nucleotide alpha hydrolases-like protein.
  
  
 0.682
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.