STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CFZ34-hydroxyphenylpyruvate dioxygenase. (391 aa)    
Predicted Functional Partners:
A0A1Y2AV53
Homogentisate 1,2-dioxygenase.
  
 0.991
A0A1Y2CZD3
Tryptophan synthase.
  
 
 0.880
A0A1Y2ACI2
Carboxyltransferase subunit of acetyl-CoA carboxylase.
  
 
 0.877
A0A1Y2BQK7
Methylcrotonoyl-CoA carboxylase.
  
 
 0.877
A0A1Y2C2T2
Methylcrotonyl-CoA carboxylase carboxyl transferase subunit.
  
 
 0.877
A0A1Y2CQU4
Carboxyl transferase.
  
 
 0.877
A0A1Y2CUP0
Histidinol-phosphate aminotransferase.
    
 0.867
A0A1Y2C2W2
Uncharacterized protein.
  
 
 0.855
A0A1Y2CPS6
Uncharacterized protein.
  
 
 0.855
A0A1Y2CR11
Uncharacterized protein.
  
 
 0.855
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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