A0A1Y2CHR7 protein (Rhizoclosmatium globosum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1Y2CHR7

Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (195 aa)

Predicted Functional Partners:

A0A1Y2BD19

0.834

A0A1Y2CGE4

0.812

A0A1Y2C5V3

0.766

A0A1Y2CRB5

0.766

A0A1Y2C4U4

0.725

A0A1Y2C013

0.720

A0A1Y2CVK2

0.720

A0A1Y2CRA9

0.700

A0A1Y2ASE6

0.692

A0A1Y2B0M8

0.692

Your Current Organism:

Rhizoclosmatium globosum

NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1Y2ASE6	A0A1Y2BD19	Uncharacterized protein.	Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.643
A0A1Y2ASE6	A0A1Y2C013	Uncharacterized protein.	Peptidyl-prolyl cis-trans isomerase D.	0.687
A0A1Y2ASE6	A0A1Y2CGE4	Uncharacterized protein.	Uncharacterized protein.	0.743
A0A1Y2ASE6	A0A1Y2CHR7	Uncharacterized protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.692
A0A1Y2ASE6	A0A1Y2CRB5	Uncharacterized protein.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.606
A0A1Y2ASE6	A0A1Y2CVK2	Uncharacterized protein.	PPIase cyclophilin-type domain-containing protein.	0.698
A0A1Y2B0M8	A0A1Y2BD19	Uncharacterized protein.	Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.643
A0A1Y2B0M8	A0A1Y2C013	Uncharacterized protein.	Peptidyl-prolyl cis-trans isomerase D.	0.687
A0A1Y2B0M8	A0A1Y2CGE4	Uncharacterized protein.	Uncharacterized protein.	0.743
A0A1Y2B0M8	A0A1Y2CHR7	Uncharacterized protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.692
A0A1Y2B0M8	A0A1Y2CRB5	Uncharacterized protein.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.606
A0A1Y2B0M8	A0A1Y2CVK2	Uncharacterized protein.	PPIase cyclophilin-type domain-containing protein.	0.698
A0A1Y2BD19	A0A1Y2ASE6	Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	Uncharacterized protein.	0.643
A0A1Y2BD19	A0A1Y2B0M8	Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	Uncharacterized protein.	0.643
A0A1Y2BD19	A0A1Y2C013	Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	Peptidyl-prolyl cis-trans isomerase D.	0.455
A0A1Y2BD19	A0A1Y2C4U4	Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	Cytochrome c domain-containing protein.	0.996
A0A1Y2BD19	A0A1Y2C5V3	Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.609
A0A1Y2BD19	A0A1Y2CGE4	Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	Uncharacterized protein.	0.896
A0A1Y2BD19	A0A1Y2CHR7	Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.834
A0A1Y2BD19	A0A1Y2CRB5	Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.591