STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CIL4Methyltranfer_dom domain-containing protein. (503 aa)    
Predicted Functional Partners:
A0A1Y2BYV4
Zinc_ribbon_16 domain-containing protein.
    
 0.783
A0A1Y2BS60
WD40 repeat-like protein.
    
 0.756
A0A1Y2B3F0
WD40 repeat-like protein; Belongs to the WD repeat SEC13 family.
     
 0.665
A0A1Y2B4H1
WD40 repeat-like protein; Belongs to the WD repeat SEC13 family.
     
 0.644
A0A1Y2BR49
Uncharacterized protein.
    
 0.630
A0A1Y2BSX2
WD40 repeat-like protein.
    
 0.630
A0A1Y2BRU9
DEP domain-containing protein.
     
 0.495
A0A1Y2D131
Uncharacterized protein.
   
 
 0.495
A0A1Y2CVU2
LexA/Signal peptidase.
   
 
 0.493
A0A1Y2CV73
Nitrogen permease regulator 2.
     
 0.460
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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