STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CJ70UBX domain-containing protein. (545 aa)    
Predicted Functional Partners:
A0A1Y2BX81
SEP-domain-containing protein.
    
 0.976
A0A1Y2BZR4
SEP domain-containing protein.
    
 0.942
A0A1Y2CNL5
UBX-domain-containing protein.
    
 
 0.933
A0A1Y2BD60
Polyubiquitin-tagged protein recognition complex, Npl4 component.
   
 
 0.931
A0A1Y2BFC5
AAA-domain-containing protein.
    
 0.911
A0A1Y2CX91
AAA ATPase; Belongs to the AAA ATPase family.
    
 0.911
A0A1Y2BK28
UBX-domain-containing protein.
    
 0.906
A0A1Y2CDH4
AAA-domain-containing protein.
    
 0.906
A0A1Y2CKR9
UBX-domain-containing protein.
    
 0.906
A0A1Y2D243
AAA-domain-containing protein; Belongs to the AAA ATPase family.
    
 0.906
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.