STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CLF1Uncharacterized protein. (325 aa)    
Predicted Functional Partners:
A0A1Y2CCG3
Uncharacterized protein.
   
 0.624
A0A1Y2CW42
TPR-like protein.
    
 0.624
A0A1Y2CQ61
Uncharacterized protein.
    
 0.612
A0A1Y2CS88
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.608
A0A1Y2C8S5
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
  0.604
A0A1Y2CGN6
Ubiquitin-domain-containing protein.
    
  0.600
A0A1Y2BSU3
Uncharacterized protein.
    
  0.598
A0A1Y2CRE0
Translational machinery component.
    
  0.592
A0A1Y2CA76
Transcription factor IIA, alpha/beta subunit.
    
  0.591
A0A1Y2CHS0
DUF1546-domain-containing protein.
    
  0.589
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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