STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CMV2L domain-like protein. (579 aa)    
Predicted Functional Partners:
A0A1Y2D2W4
RING/U-box.
    
 0.725
A0A1Y2BYZ1
Cullin-domain-containing protein; Belongs to the cullin family.
    
 0.699
A0A1Y2CRT3
Cullin-domain-containing protein; Belongs to the cullin family.
    
 0.699
A0A1Y2B1L5
E3 ubiquitin ligase SCF complex, Skp subunit; Belongs to the SKP1 family.
   
 0.692
A0A1Y2CZ35
Ubiquitin-protein ligase; Belongs to the SKP1 family.
   
 0.692
A0A1Y2CZ50
E3 ubiquitin ligase SCF complex, Skp subunit; Belongs to the SKP1 family.
   
 0.692
A0A1Y2BD83
POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.683
A0A1Y2C6Z1
Ubiquitin.
    
 0.646
A0A1Y2BUH0
Uncharacterized protein.
    
 0.624
A0A1Y2BUH3
AN1-type domain-containing protein.
    
 0.624
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.