STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CPD5Alpha/beta-hydrolase. (278 aa)    
Predicted Functional Partners:
A0A1Y2CPQ3
Carboxymethylenebutenolidase.
     
 0.724
A0A1Y2CS65
Mitochondrial hydroxyacid-oxoacid transhydrogenase.
  
 
 0.700
A0A1Y2CYI7
Inositol phosphatase; Belongs to the FBPase class 1 family.
   
 
  0.606
A0A1Y2CTW4
Galactose mutarotase-like protein.
     
 0.604
A0A1Y2C1N4
Uncharacterized protein.
  
 
 0.560
A0A1Y2C9D3
Uncharacterized protein.
  
 
 0.560
A0A1Y2ABY9
GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins which plays important roles in the quality control and ER-associated degradation of GPI-anchored proteins.
  
 
 0.558
A0A1Y2D3E4
Alpha/beta-hydrolase.
  
 
 0.558
A0A1Y2B9W7
DAGKc domain-containing protein.
    
 0.530
A0A1Y2CYR1
DAGKc domain-containing protein.
    
 0.530
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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