STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CPR9Zw10-domain-containing protein. (353 aa)    
Predicted Functional Partners:
A0A1Y2B1Y2
PX domain-containing protein.
    
 0.988
A0A1Y2CAY0
Rod_C domain-containing protein.
   
 0.970
A0A1Y2C836
Uncharacterized protein.
    
 0.969
A0A1Y2CN48
Uncharacterized protein.
   
 0.969
A0A1Y2CXP8
Sec39 domain-containing protein.
    
 0.969
A0A1Y2B563
Uncharacterized protein.
    
 0.968
A0A1Y2B7N2
Snare-like protein; Belongs to the synaptobrevin family.
    
 0.882
A0A1Y2CWN8
Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.
    
 0.867
A0A1Y2BV92
Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.
    
 0.858
A0A1Y2CF17
Kinase-like protein.
    
 0.833
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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