STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CQ82Tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (439 aa)    
Predicted Functional Partners:
A0A1Y2C2F0
Mitochondrial tryptophanyl tRNA synthetase 2; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.868
A0A1Y2CK88
Tyrosine--tRNA ligase.
  
 
 0.833
A0A1Y2CJE2
IGPS-domain-containing protein.
  
  
 0.774
A0A1Y2B0U1
Cytoplasmic serine-tRNA ligase Srs1.
  
 
 0.772
A0A1Y2BN69
Seryl-tRNA synthetase.
  
 
 0.740
A0A1Y2BX57
Ribosomal_S10 domain-containing protein.
  
 
 0.728
A0A1Y2ACJ4
Leucyl-tRNA synthetase.
  
 
 0.712
A0A1Y2CM82
Arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.682
A0A1Y2CZS0
tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.679
A0A1Y2BT19
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.662
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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