STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CQQ5Uncharacterized protein. (649 aa)    
Predicted Functional Partners:
A0A1Y2BPP4
TPR_REGION domain-containing protein.
   
 
 0.866
A0A1Y2BPL5
Uncharacterized protein.
   
 
 0.657
A0A1Y2BPL8
Kinase-like protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.657
A0A1Y2BYU2
DNA helicase; Belongs to the MCM family.
   
 
  0.555
A0A1Y2CUN0
MCM-domain-containing protein; Belongs to the MCM family.
   
 
  0.555
A0A1Y2B712
Ribosomal protein S3Ae.
    
 
 0.542
A0A1Y2C7S2
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
      
 0.432
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.