STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CRC4Uncharacterized protein. (1447 aa)    
Predicted Functional Partners:
A0A1Y2CZD3
Tryptophan synthase.
    
 0.752
A0A1Y2CLI8
CNDP dipeptidase.
   
 0.583
A0A1Y2D1F7
PLP-dependent transferase.
   
 0.576
A0A1Y2BP35
Pyridine nucleotide-disulfide oxidoreductase.
  
 0.550
A0A1Y2CRI9
Dihydrolipoyl dehydrogenase.
  
 0.550
A0A1Y2CVC6
Uncharacterized protein.
  
 0.546
A0A1Y2CY96
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
     
 0.544
A0A1Y2CA29
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
    
 0.511
A0A1Y2B5V5
Chorismate mutase.
    
 0.508
A0A1Y2BZR3
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
    
 0.499
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.