STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CRH9RNB-domain-containing protein. (1017 aa)    
Predicted Functional Partners:
A0A1Y2CUX8
S1 motif domain-containing protein.
   
 0.963
A0A1Y2D3K2
Uncharacterized protein.
   
 0.963
A0A1Y2CQB7
Uncharacterized protein.
   
 0.955
A0A1Y2C2R2
Uncharacterized protein.
   
 0.954
A0A1Y2CMR5
Uncharacterized protein.
   
 0.951
A0A1Y2C9S5
Ribosomal protein S5 domain 2-like protein.
  
 0.950
A0A1Y2CMS4
Ribosomal protein S5 domain 2-like protein.
  
 0.950
A0A1Y2D156
ECR1_N domain-containing protein.
   
 0.950
A0A1Y2D2Z3
Tr-type G domain-containing protein.
   
 0.943
A0A1Y2CTX9
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.940
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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