STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2CRY7Uncharacterized protein. (264 aa)    
Predicted Functional Partners:
A0A1Y2CLJ6
WD40 repeat-like protein.
    
 0.977
A0A1Y2C8D4
GLE1-domain-containing protein.
   
 0.921
A0A1Y2C4V7
Uncharacterized protein.
    
 0.855
A0A1Y2B3F0
WD40 repeat-like protein; Belongs to the WD repeat SEC13 family.
    
 0.806
A0A1Y2CA89
Zn_dep_PLPC domain-containing protein.
   
 0.804
A0A1Y2D1W4
Nuclear pore protein.
     
 0.799
A0A1Y2BRP7
Uncharacterized protein.
    
 0.793
A0A1Y2C791
Nucleoporin-domain-containing protein.
   
 0.789
A0A1Y2C8U9
WD40 repeat-like protein.
    
 0.785
A0A1Y2CL35
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.779
Your Current Organism:
Rhizoclosmatium globosum
NCBI taxonomy Id: 329046
Other names: R. globosum, Rhizoclosmatium sp. JEL06
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.